Qlucore Omics Explorer pipeline

Qlucore Omics Explorer specifications

Information


Unique identifier OMICS_05695
Name Qlucore Omics Explorer
Software type Toolkit/Suite
Interface Graphical user interface
Restrictions to use License purchase required
Input format TXT,CSV,CEL,BAM,VCF,BED,GTF
Output format PDF
Biological technology Illumina, Affymetrix, Agilent Technologies, Luminex
Operating system Mac OS, Windows
License Commercial
Computer skills Medium
Version 3.3
Stability Stable
Free trial Yes
Registration required Yes
Maintained Yes

Versioning


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Documentation


Maintainer


  • person_outline Qlucore Omics Explorer Team <>

Qlucore Omics Explorer citations

 (2)
2016
PMCID: 4905462

[…] difference in mean methylation between groups. pca and hierarchical clustering (hcl) with heat maps displaying the methylation and gene expression levels for the individual samples were done with qlucore omics explorer software v3.0 (qlucore ab, lund, sweden). each variable was normalized to mean 0 and variance 1. hcl was done using the euclidean metric and the average linkage criteria. gene […]

2014
PMCID: 3946172

[…] by the benjamini-hochberg method. differentially expressed lncrnas were chosen for further evaluation (q<0.15). principal component analysis (pca) and hierarchical clustering were performed in qlucore omics explorer 2.3 to examine whether telangiectasial and non-telangiectasial samples could be separated., to assess the potential cis-regulatory effect of the differentially expressed […]

Qlucore Omics Explorer funding source(s)
Supported by the European Union's Seventh Framework Programme for research, technological development and demonstration under grant agreement 601851.

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