QmRLFS-finder statistics

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Citations per year

Number of citations per year for the bioinformatics software tool QmRLFS-finder
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Tool usage distribution map

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Associated diseases

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Popular tool citations

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QmRLFS-finder specifications

Information


Unique identifier OMICS_08058
Name QmRLFS-finder
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data DNA/RNA sequence(s)
Input format FASTA
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Vladimir Kuznetsov

Information


Unique identifier OMICS_08058
Name QmRLFS-finder
Interface Web user interface
Restrictions to use None
Input data DNA/RNA sequence(s)
Input format FASTA
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Vladimir Kuznetsov

Publication for QmRLFS-finder

QmRLFS-finder citation

library_books

Transcription coupled genetic instability marks acute lymphoblastic leukemia structural variation hotspots

2016
eLife
PMCID: 4951197
PMID: 27431763
DOI: 10.7554/eLife.13087.060

[…] s were quantified using HOMER at TSS regions. Statistical significance was estimated separately for the two different restriction enzyme digestions. RLFS motif search was performed using the software QmRLFS-finder that predicts R-loop forming sequences based on structural models of known sequences (). The fasta input file was generated by extracting DNA sequences based on the hg19 genome version. […]


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QmRLFS-finder institution(s)
Department of Genome and Gene Expression Data Analysis, Bioinformatics Institute, Agency for Science, Technology and Research (A*STAR), Singapore
QmRLFS-finder funding source(s)
Biomedical Research Council of Agency for Science, Technology and Research (A*STAR), Singapore

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