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QmRLFS-finder

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Predicts R-loop Forming Sequences (RLFSs) in nucleic acid sequences based on experimentally supported structural models of RLFSs. This tool identifies and visualizes RLFS coordinates from any natural or artificial DNA or RNA input sequences and creates standards-compliant output files for further annotation and analysis. QmRLFS-finder demonstrates highly accurate predictions of the detected RLFSs, proposing new perspective to further discoveries in R-loop biology, biotechnology and molecular therapy.

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1 user review

1 user review

Rangsit's avatar image

Rangsit

It can predict more target compare to the previous one.

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QmRLFS-finder versioning

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QmRLFS-finder classification

QmRLFS-finder specifications

Software type:
Package/Module
Restrictions to use:
None
Input format:
FASTA
Computer skills:
Advanced
Maintained:
Yes
Interface:
Command line interface
Input data:
DNA/RNA sequence(s)
Operating system:
Unix/Linux
Stability:
Stable

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QmRLFS-finder forum

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Participate in the forum to get support for using tools. Ask questions about technical specifications.

No open topic.

QmRLFS-finder classification

QmRLFS-finder specifications

Interface:
Web user interface
Input data:
DNA/RNA sequence(s)
Computer skills:
Basic
Maintained:
Yes
Restrictions to use:
None
Input format:
FASTA
Stability:
Stable

QmRLFS-finder support

Maintainer

  • Vladimir Kuznetsov <>
  • Vladimir Kuznetsov <>

Credits

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Publications

Institution(s)

Department of Genome and Gene Expression Data Analysis, Bioinformatics Institute, Agency for Science, Technology and Research (A*STAR), Singapore

Funding source(s)

Biomedical Research Council of Agency for Science, Technology and Research (A*STAR), Singapore

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