qqman pipeline

qqman specifications


Unique identifier OMICS_12451
Name qqman
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 0.1.2
Stability Stable
Source code URL https://cran.r-project.org/src/contrib/qqman_0.1.4.tar.gz
Maintained Yes



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  • person_outline Stephen Turner <>

Publication for qqman

qqman IN pipeline

PMCID: 5438072
PMID: 27029810
DOI: 10.1038/ncomms11174

[…] excluding genotype using the r package survival and then used plink 1.9 (ref. 40) to perform a gwas scan at array snps for these residuals. manhattan plots were created in r using the package qqman41. for the two clearly associated regions, we then created locus zoom plots using imputed genotypes and the martingale residuals (the discovery phase). the top array snp for mothers and fathers […]

qqman institution(s)
Department of Public Health Sciences, University of Virginia School of Medicine, Charlottesville, VA, USA

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