QRNA pipeline

QRNA specifications

Information


Unique identifier OMICS_15802
Name QRNA
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Source code URL http://eddylab.org/software/rnabob/rnabob.tar.gz
Maintained Yes

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Maintainer


  • person_outline Elena Rivas <>

Publication for QRNA

QRNA citation

2016
PMCID: 4945096

[…] from the rna samples using the ribo-zero rrna removal kit (plant leaf) (epicentre). one hundred ng of the rrna-depleted rna was used for library construction using the nextflex rapid directional qrna-seq kit (bioo scientific) according the manufacturer’s instructions. the adapters provided with the kit include 8-nt molecular labels that were used during data processing to remove pcr bias. […]

QRNA institution(s)
Howard Hughes Medical Institute and Department of Genetics, Washington University School of Medicine, Saint Louis, MO, USA
QRNA funding source(s)
This work was partially supported by a postdoctoral grant from the Sloan Foundation, by the Howard Hughes Medical Institute and the NIH National Human Genome Research Institute.

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