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Detects quantitative trait locus (QTLs) from experimental designs in outbred populations. QTLMap was used to analyze genetic variability of traits in various experimental designs with linkage analysis approaches. It employs an algorithm for the estimation of transmission probabilities and is able to deal with high numbers of markers in single nucleotide polymorphisms (SNPs). This tool provides a choice of simulation procedures that permits the calculation of rejection thresholds.

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QTLMap classification

QTLMap specifications

Software type:
Restrictions to use:
Output data:
A general listing.
Programming languages:
Command line interface
Input data:
A genetic map, a pedigree, some markers genotypes and traits values.
Operating system:
Computer skills:

QTLMap distribution


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INRA Agrocampus Ouest, UMR0598, Rennes, France; INRA, UR0631, Castanet Tolosan, France; INRA AgroParisTech, UMR1313, Jouy en Josas, France

Link to literature

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