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An R package that aims to provide a user-friendly and platform-independent tool to visualize quantitative trait loci (QTL) mapping results. The graphical functions of the QTLNetworkR are based upon lattice and grid packages, and the graphical user interface (GUI) of the QTLNetworkR is built upon RGtk2 and gWidgetsRGtk2 packages. Six functions are designed to help visualize marker interval, putative QTL, QTL-by-environment interactions, marker interval interactions, epistasis, and the predicted genetic architecture of complex traits. It is especially helpful in profiling results for multiple traits at multiple environments.

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QTLNetworkR versioning

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QTLNetworkR classification

QTLNetworkR specifications

Software type:
Package
Restrictions to use:
None
Programming languages:
R
Stability:
Stable
Interface:
Graphical user interface
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Medium

Publications

  • (Zheng et al., 2010) QTLNetworkR: an interactive R package for QTL visualization. Journal of Zhejiang University Science.
    PMID: 20593516

QTLNetworkR support

Maintainer

Link to literature

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