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quantroSim | A data-driven approach to guide the choice of an appropriate normalization method

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An R-package to simulate gene expression and DNA methylation data. The R-package quantroSim is the supporting data simulation package for the quantro R/Bioconductor package which can be used to simulate data from the epigenome including gene expression (microarrays, but will be extended to include RNA-Seq) and DNA methylation (microarrays).

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quantroSim forum

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quantroSim classification

quantroSim specifications

Unique identifier:
OMICS_08843
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Programming languages:
R
Stability:
Stable

quantroSim distribution

versioning

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No versioning.

quantroSim support

Documentation

Maintainer

  • Stephanie Hicks <>

Credits

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Publications

Institution(s)

Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA, USA; Department of Biostatistics, Harvard School of Public Health, Boston, MA, USA

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