QuickRNASeq specifications


Unique identifier OMICS_10985
Name QuickRNASeq
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Input data In addition to raw sequence reads in FASTQ format, the only other required inputs are a reference genome file in FASTA format and a corresponding gene annotation file in GTF (gene transfer format).
Input format FASTQ, GTF
Output data The dynamic visualization features enable end users to explore and digest RNA-seq data analyses results intuitively and interactively, and to gain deep insights into RNA-seq datasets.
Operating system Unix/Linux
Programming languages Javascript, Perl, R, Shell (Bash)
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.2
Stability Stable
Requirements edgeR, reshape, ggplot
Maintained Yes



Add your version



Additional information


Publications for QuickRNASeq

QuickRNASeq institution(s)
Early Clinical Development, Pfizer Worldwide R&D, Cambridge, MA, USA; Inflammation & Immunology Research Unit, Pfizer WRD, Cambridge, MA, USA

QuickRNASeq reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review QuickRNASeq