QuiXoT statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left All-in-one tools chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

QuiXoT specifications

Information


Unique identifier OMICS_21743
Name QuiXoT
Software type Toolkit/Suite
Interface Graphical user interface
Restrictions to use None
Operating system Windows
Programming languages C#
Computer skills Medium
Version 1.5.02
Stability Stable
Maintained Yes

Download


Versioning


Add your version

Maintainers


  • person_outline Jesus Vazquez <>
  • person_outline Pedro Navarro <>

Additional information


https://www.cnic.es/wiki/proteomica/index.php/QuiXoT

Publication for QuiXoT

QuiXoT in publications

 (10)
PMCID: 5566220
PMID: 28827575
DOI: 10.1038/s41598-017-09042-2

[…] peptide determined as previously described. protein quantification from reporter ion intensities and statistical analysis of quantitative data to identify significant proteins were performed using quixot based on a statistical model previously described. in this model protein log2-ratios are expressed in form of the standardized variables, i.e., in units of standard deviation according […]

PMCID: 5220168
PMID: 28064117
DOI: 10.1016/j.redox.2016.12.013

[…] set at p<0.05 in all cases. a 1% peptide fdr threshold was considered. peptide and protein abundance changes were assessed using the itraq reporter ion intensities retrieved from ms/ms scans by quixot software , as inputs to the wspp model . this model circumvents the statistical issues reported for protein quantitation from itraq-labeled peptides and, by decomposing the different […]

PMCID: 5342688
PMID: 27776345
DOI: 10.18632/oncotarget.12789

[…] was assigned only to the best protein proposed by the proteome discoverer algorithm. quantitative information was extracted from ms/ms spectra using a quantitative proteomics software package (quixot) [], and protein abundance changes were analyzed using the generic integration algorithm []. calculation of statistical weights of each quantitation at the spectrum level was performed […]

PMCID: 5000436
PMID: 27561965
DOI: 10.1186/s13071-016-1747-3

[…] of each peptide determined as described previously []. protein quantification from reporter ion intensities and statistical analysis of quantitative data were performed as described previously using quixot [, ]. the intensity of the reporter peaks was used to calculate the fitting weight of each spectrum in the statistical model as described previously []. outliers at the scan and peptide levels […]

PMCID: 4894368
PMID: 27272971
DOI: 10.1038/srep27351

[…] method was used to filter peptides for quantitation, as previously described. protein quantification from reporter ion intensities and statistical analysis of quantitative data were performed using quixot, based on a statistical model previously described. in this model protein log2-ratios are expressed as a standardized variable, i.e., in units of standard deviation according […]


To access a full list of publications, you will need to upgrade to our premium service.

QuiXoT institution(s)
Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC), Madrid, Spain; Centro de Biología Molecular Severo Ochoa (CBMSO), CSIC−UAM, Madrid, Spain
QuiXoT funding source(s)
Supported by grants BIO2012-37926 and BIO2015-67580-P from the Spanish Ministry of Economy and Competitiveness and grant PRB2 (IPT13/0001 - ISCIIISGEFI/FEDER, ProteoRed) and RD12/0042/0056 from RIC-Red Temática de Investigación Cooperativa en Salud (RETICS), Fondo de Investigaciones Sanitarias, Instituto de Salud Carlos III; by the Spanish Ministry of Economy and Competitiveness (MINECO) and the Pro-CNIC Foundation, and Severo Ochoa Center of Excellence (MINECO award SEV-2015-0505).

QuiXoT reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review QuiXoT