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RADIS specifications

Information


Unique identifier OMICS_12235
Name RADIS
Alternative name analysis of RAD-seq data for InterSpecific phylogeny
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Biological technology Illumina
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Version 1.0.0
Stability Stable
Requirements
R, Stacks, RAxML
Maintained Yes

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Maintainer


  • person_outline Astrid Cruaud <>

Publication for analysis of RAD-seq data for InterSpecific phylogeny

RADIS in publications

 (10)
PMCID: 5684485
PMID: 29170655
DOI: 10.3389/fmicb.2017.02180

[…] which consist of usually less than 30 amino acids and autonomously translocate across biological membranes, even when present as fusion partner of a large cargo protein (takeuchi and futaki, ; radis-baptista et al., ). cpps are either directly transported across the membrane or are delivered by endocytosis (scharnert et al., ; radis-baptista et al., ). both transport pathways were observed […]

PMCID: 5022160
PMID: 27651828
DOI: 10.1186/s13031-016-0096-3

[…] regularly conducted all over the world, structuring them to promote peace could have large and multiplicative benefits on the stability of communities around the globe., the authors thank charles radis, daniel crothers, william douglas, sean lena, shikuku ooko, joshua mcmillan, frank hubbell, and robert owot for their role in organizing the first aid course and offering opinions […]

PMCID: 5049668
PMID: 26358624
DOI: 10.1111/nph.13630

[…] but bear only hypocotyl‐borne roots (scheres et al., ). we found wol to be one of the most ubiquitous cytokinin signalling components in the azolla root. in addition, a possible homologue of brevis radis (azfirt34406; e‐value 1.01 × 10−06; table s5) was also detected, which is thought to be crucial for cytokinin's regulation of lateral root formation (li et al., ). what could this imply […]

PMCID: 4375834
DOI: 10.1186/s12906-015-0518-6

[…] cassandra quave , usa, annie quignard-boulange , france, jael quintero , mexico, raymond quock , usa, rahmatullah qureshi , pakistan, karim raafat , lebanon, mohamed rabeh , egypt, gandhi radis-baptista , brazil, atiar rahman , bangladesh, md masudur rahman , bangladesh, najm-ur rahman , pakistan, batool rahmati , iran, mohammad rahmati yamchi , iran, mohammed rahmatullah , […]


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RADIS institution(s)
INRA, UMR1062 CBGP, Montferrier-sur-Lez, France; IBC, Montpellier, France; INRA, UMR441 LIPM, Castanet Tolosan, France; CNRS, UMR2594 LIPM, Castanet Tolosan, France
RADIS funding source(s)
This work was funded by the division SPE of the INRA, the ANR project “TriTIC”.

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