Rahnuma specifications

Information


Unique identifier OMICS_11600
Name Rahnuma
Interface Web user interface
Restrictions to use None
Programming languages Java
Database management system MySQL
Computer skills Basic
Stability No
Maintained No

Publication for Rahnuma

Rahnuma in publications

 (5)
PMCID: 5797656
PMID: 29441045
DOI: 10.3389/fmicb.2018.00035

[…] (mithani et al., , ) a euclidean distance is calculated based on the absence or presence of the reactions in different individuals or strains. in the “all but one analysis” included in the software rahnuma (mithani et al., ), and then redefined by mithani et al. (), the user can identify pathways and reactions present in some organisms but absent in others. the identification of a core network […]

PMCID: 5851934
PMID: 29552648
DOI: 10.1016/j.synbio.2017.11.002

[…] connects all of its participating metabolites (represented as vertices). however, due to the dearth of sophisticated algorithms which can be applied to search hypergraphs, only three methods, namely rahnuma , metabolic tinker and the method developed by carbonell et al. , use hypergraph directly, whereas another tool, foglight simplifies the hypergraph into matrices before performing pathway […]

PMCID: 4940209
PMID: 27155495
DOI: 10.1016/j.vaccine.2016.04.074

[…] of importance to developing countries., we acknowledge the serum staten institute for kindly providing bulk vaccine for use in this study. in addition, the authors wish to thank john donnelly and rahnuma wahid for technical support and guidance and review of this manuscript; john ballenot and clint posey for assistance in the development of this article. we would also like to thank yuxiao […]

PMCID: 3878188
PMID: 24359015
DOI: 10.1186/1546-0096-11-46

[…] like to acknowledge the participants and their families for putting in their time and being a part of this study. as well, we would like to thank university of saskatchewan’s dr. ralph dieters and rahnuma kazi for the design of the pingo© tablet application. finally, we would like to thank north american society of pediatric exercise medicine for providing partial funding for the purchasing […]

PMCID: 2917375
PMID: 20700467
DOI: 10.1371/journal.pcbi.1000868

[…] genes ( glta, gapa, rpod, gyrb) . the metabolic network data was extracted from the kegg database on january 2010 for pathway maps across the seventeen pseudomonas strains shown in using the rahnuma tool . the evolution parameters were also compared between two pseudomonas species: p. fluorescens, a saprotroph that colonizes the soil environment, and p. syringae, a plant-pathogen […]


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Rahnuma institution(s)
Department of Statistics, University of Oxford, Oxford, UK; Department of Plant Sciences, University of Oxford, Oxford, UK
Rahnuma funding source(s)
Higher Education Commission, Government of Pakistan; The Royal Society; Biotechnology and Biological Sciences Research Council (grant BB/E007872/1)

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