RAUR specifications


Unique identifier OMICS_13127
Alternative name Re-alignment of unmapped reads
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Reads, parameter K
Input format FASTQ
Output data Trimmed reads
Output format FASTQUnix/Linux
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Stability No
BWA, Bowtie2, soap
Source code URL http://netlab.csu.edu.cn/bioinformatics/RAURtools.zip
Maintained No


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Publication for Re-alignment of unmapped reads

RAUR institution(s)
School of Information Science and Engineering, Central South University, Changsha, China; Department of Computer Science, Georgia State University, Atlanta, GA, USA
RAUR funding source(s)
National Natural Science Foundation of China under grant nos. 61232001, 61379108, and 61370172; Hunan Provincial Innovation Foundation For Postgraduate (CX2013B070); Science and Technology Plan Projects of Science and Technology Bureau of Hengyang City (grant 2013KJ29)

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