Ray specifications

Information


Unique identifier OMICS_00027
Name Ray
Alternative names OCLRay, Ray Surveyor, Ray Meta
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Parallelization MPI
Computer skills Advanced
Version 2.3.1
Stability Stable
Maintained Yes

Download


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Versioning


No version available

Documentation


Maintainers


  • person_outline Sebastien Boisvert <>
  • person_outline Jacques Corbeil <>

Additional information


An algorithm of Ray in OpenCL, OCLRay, is also available : http://doi.ieeecomputersociety.org/10.1109/TCBB.2017.2696522

Publications for Ray

Ray institution(s)
Centre de Recherche en Infectiologie, CHU de Quebec-Universite Laval, Quebec City, QC, Canada; Centre de Recherche en Donnees Massives de l’Universite Laval, Quebec City, QC, Canada; Departement de Medecine Moleculaire, Universite Laval, Quebec City, QC, Canada; Gydle Inc., Quebec City, QC, Canada; Departement de Biochimie, Microbiologie et Bio-informatique, Universite Laval, Quebec City, QC, Canada; Departement d’Informatique et de Genie Logiciel, Universite Laval, Quebec City, QC, Canada
Ray funding source(s)
Supported by a Mitacs post-doctoral fellowship, the Fonds de recherche du Quebec-Sante, the Canada Foundation for Innovation (CFI), the National Science and Engineering Research Council (NSERC), NanoQue´bec, and the Fonds Que´be´cois de Recherche sur la Nature et les Technologies (FQRNT).

Ray review

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Fabien Pichon

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Desktop
A light and efficient assembler that perform well for small genomes (not tried on eucaryote ones), with good computer memory gestion (the only one that didn't crash because of a segmentation fault!).