Read assembly software tools | Repertoire sequencing data analysis

A toolkit for processing raw reads from high-throughput sequencing of lymphocyte repertoires.

Assembles paired-end reads rapidly and with the correction of most errors.

Produces merged raw Illumina paired-end reads with low false positive rates (FPRs). PEAR combines reads by maximizing the assembly score (AS) of the read overlap via a scoring matrix. It evaluates all possible paired-end read overlaps and does not require the target fragment size as input. This method takes quality scores and sequence matches into account.