RECLU specifications
- Unique identifier:
- OMICS_07114
- Interface:
- Command line interface
- Operating system:
- Unix/Linux
- License:
- GNU General Public License version 2.0
- Stability:
- Stable
- Maintained:
- Yes
- Software type:
- Pipeline/Workflow
- Restrictions to use:
- None
- Programming languages:
- C++, Perl, R, Shell (Bash)
- Computer skills:
- Advanced
- Requirements:
- SAMtools, BEDtools
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Publications
-
(Ohmiya et al., 2014)
RECLU: a pipeline to discover reproducible transcriptional start sites and their alternative regulation using capped analysis of gene expression (CAGE).
BMC Genomics.
PMID: 24779366 DOI: 10.1186/1471-2164-15-269
Institution(s)
RIKEN Center for Life Science Technologies (CLST), Division of Genomic Technologies, RIKEN Yokohama Institute, Tsurumi-ku, Yokohama, Japan
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