ReCount specifications

Information


Unique identifier OMICS_19329
Name ReCount
Alternative name recount2
Restrictions to use None
Community driven No
Data access File download, Browse, Application programming interface
User data submission Allowed
Maintained Yes

Maintainers


  • person_outline Leonardo Collado-Torres <>
  • person_outline Ben Langmead <>
  • person_outline Andrew E. Jaffe <>
  • person_outline Jeffrey Leek <>

Additional information


http://bioconductor.org/packages/release/bioc/html/recount.html https://github.com/leekgroup/recount https://github.com/leekgroup/recount-contributions http://bowtie-bio.sourceforge.net/recount/

Publication for ReCount

ReCount institution(s)
Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA; Center for Computational Biology, Johns Hopkins University, Baltimore, MMD, USA; Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA; Department of Biomedical Engineering, Oregon Health & Science University, Portland, OR, USA; Department of Surgery, Oregon Health & Science University, Portland, OR, USA; Computational Biology Program, Oregon Health & Science University, Portland, OR, USA; Division of Biostatistics and Bioinformatics, Department of Oncology, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA; McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore, MD, USA; Department of Mental Health, Johns Hopkins University, Baltimore, MD, USA; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA
ReCount funding source(s)
Supported by the Common Fund of the Office of the Director of the National Institutes of Health, the NCI, NHGRI, NHLBI, NIDA, NIMH and NINDS, NCI/SAIC-Frederick, Inc. (SAIC-F) subcontracts to the National Disease Research Interchange (10XS170), Roswell Park Cancer Institute (10XS171), and Science Care, Inc. (X10S172), a contract (HHSN268201000029C) to The Broad Institute, Inc., an SAIC-F subcontract to Van Andel Institute (10ST1035), SAIC-F (HHSN261200800001E), a supplement to University of Miami grants DA006227 and DA033684 and to contract N01MH000028, the University of Geneva (MH090941 & MH101814), the University of Chicago (MH090951, MH090937, MH101820, MH101825), the University of North Carolina–Chapel Hill (MH090936 & MH101819), Harvard University (MH090948), Stanford University (MH101782), Washington University St. Louis (MH101810) and the University of Pennsylvania (MH101822), NIH R01 GM105705, Consejo Nacional de Ciencia y Tecnología México 351535, 1R21MH109956, AWS in Education research grants and a grant from Seven Bridges Genomics for use of the Cancer Genomics Cloud.

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