RAGB specifications

Unique identifier:
OMICS_22436
Alternative name:
RAGB Monitor
Interface:
Command line interface
Input data:
The gene sequence of a reference DNA element, and a set of target genome sequences.
Output format:
CSV
Programming languages:
Python
Stability:
Stable
Name:
Reference-Anchored Gene Blocks
Software type:
Application/Script
Restrictions to use:
None
Input format:
GBK,CSV
Operating system:
Unix/Linux
Computer skills:
Advanced
Maintained:
Yes

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RAGB support

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Publications

Institution(s)

Department of Computer Science, Ben-Gurion University, Beer-Sheva, Israel; National Institute for Biotechnology in the Negev, Ben-Gurion University, Beer-Sheva, Israel; Department of Industrial Engineering and Management, Ben-Gurion University, Beer-Sheva, Israel

Funding source(s)

Supported by the People Programme (Marie Curie Actions) of the European Union’s Seventh Framework Programme (FP7/2007–2013) under REA grant agreement number 631163.11, and by the Israel Science Foundation (grant No. 551145/); by the Israel Science Foundation (grant No. 179/14.) and by the Frankel Center for Computer Science at Ben Gurion University.

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