Main logo
?
tutorial arrow
×
Submit new tools
Share tools covering the current topic. Provide easy-to-follow guidelines to improve their usability.
Share new tools with the community
Sign up for free to promote the availability of bioinformatics tools

Reference management software tools | Information retrieval

Bibliographic management tools have been widely used by researchers to store, organize, and manage their references for research papers, theses, dissertations, journal articles, and other publications. There are a number of reference management…
SRA
Web

SRA Systematic Review Assistant

Offers users a reliable program to remove duplicate records with greater…

Offers users a reliable program to remove duplicate records with greater sensitivity and specificity than EndNote. SRA aimed to reduce the amount of time taken to produce systematic reviews by…

Rayyan
Web
Mobile

Rayyan

Helps expedite the initial screening of abstracts and titles using a process of…

Helps expedite the initial screening of abstracts and titles using a process of semi-automation while incorporating a high level of usability. Rayyan lightens the load of systematic review authors by…

RefDB
Desktop

RefDB

Permits to share databases over a network. RefDB consists of an application…

Permits to share databases over a network. RefDB consists of an application server which interacts with a relational database on the server side and a variety of clients on the workstation side. It…

refbase
Desktop

refbase Web Reference Database

Imports and exports references in various formats. refbase can make formatted…

Imports and exports references in various formats. refbase can make formatted lists of citations and offers powerful searching, rich metadata, and RSS. It permits to display lists in compact list,…

Qiqqa
Desktop
Mobile

Qiqqa

Provides a secured interface to store PDFs and makes them instantly accessible…

Provides a secured interface to store PDFs and makes them instantly accessible and searchable across different devices. Qiqqa automatically captures all tags, comments, highlights and annotations…

Pybliographer
Desktop

Pybliographer

Allows to manage bibliographic databases. Pybliographer provides a…

Allows to manage bibliographic databases. Pybliographer provides a user-friendly interface that allows user to edit, search, insert citations. It permits to search in external databases like PubMed,…

Publish or…
Desktop

Publish or Perish

Retrieves and analyzes academic citations. Publish or Perish uses Google…

Retrieves and analyzes academic citations. Publish or Perish uses Google Scholar and Microsoft Academic Search to obtain the raw citations, then analyzes these and presents different metrics such as:…

Papers
Desktop
Mobile

Papers

Permits to collect and curate the research material. Papers helps the user to…

Permits to collect and curate the research material. Papers helps the user to focus on the task at hand. It allows the user to highlight, underline, strike through and add sticky notes. The tool…

Paperpile
Desktop

Paperpile

Manages references collaboratively. Paperpile uses the Citation Style Language…

Manages references collaboratively. Paperpile uses the Citation Style Language (CSL) to format citations and supports thousands of different journal styles. It aims to radically simplify the workflow…

JabRef
Desktop

JabRef

Allows to manage bibliography references. JabRef supports all references in…

Allows to manage bibliography references. JabRef supports all references in BibTeX. It permits to organize entries into overlapping logical groups, and with a single click limit view to a single…

Import.io
Web

Import.io

Extracts web data and permits use it in all sorts of ways. Import.io returns…

Extracts web data and permits use it in all sorts of ways. Import.io returns data that can be used for price monitoring, lead generation, market research, app development, academic research or…

EPPI-Reviewer
Web

EPPI-Reviewer

Allows research synthesis. EPPI-Reviewer manages references, stores PDF files,…

Allows research synthesis. EPPI-Reviewer manages references, stores PDF files, facilitates qualitative and quantitative analyses and allows easy export of review data to enable use with other…

Docear
Desktop

Docear

Helps to organize, create, and discover academic literature. Docear provides a…

Helps to organize, create, and discover academic literature. Docear provides a user-interface that allows to sort documents into categories, to sort annotations within PDFs and to view multiple…

Aigaion
Desktop

Aigaion

Speeds up the search for publications one has already read and supports the…

Speeds up the search for publications one has already read and supports the user in structuring information. Aigaion provides a bibliography management environment that supports a user in organizing…

Referencer
Desktop

Referencer

Organizes documents or references, and generates a BibTeX bibliography file.…

Organizes documents or references, and generates a BibTeX bibliography file. Referencer can deal with any kind of document that BibTeX can. It searches for key identifiers of any PDF file added such…

PubMed2XL
Desktop

PubMed2XL

Converts PubMed.gov citations to Microsoft Excel 2007 or OpenDocument…

Converts PubMed.gov citations to Microsoft Excel 2007 or OpenDocument spreadsheets. PubMed2XL uses "stylesheets" to determine the output format of the spreadsheet that it creates. It…

Mendeley
Desktop
Mobile

Mendeley

Allows to organize and search personal library, annotate documents and cite as…

Allows to organize and search personal library, annotate documents and cite as the user write. Mendeley automatically captures information like authors, title and publisher, which makes organization…

MAGICapp
Web

MAGICapp

Improves patient care through guidelines, evidence summaries and decision aids.…

Improves patient care through guidelines, evidence summaries and decision aids. MAGICapp aims to improve the authoring, adaptation, presentation, dynamic updating, and dissemination of medical…

KBibTeX
Desktop

KBibTeX

Allows to edit in BibTeX bibliographies used with LaTeX. KBibTeX is configured…

Allows to edit in BibTeX bibliographies used with LaTeX. KBibTeX is configured using CMake. It permits to search and import new references from Google Scholar or BibSonomy. The tool can be used as a…

EROS
Web

EROS Early Review Organizing System

Organizes the initial phases of a systematic review. EROS facilitates…

Organizes the initial phases of a systematic review. EROS facilitates independent revision of references and easy immediate resolution of discrepancies. It reduces human error due to the…

EndNote
Desktop
Mobile

EndNote

Offers tools for learning how to do research, cite sources, write term papers,…

Offers tools for learning how to do research, cite sources, write term papers, and even match a manuscript to a scientific journal. EndNote uses built-in connections to search the 5 most popular…

DistillerSR
Desktop

DistillerSR

Provides full support for international character sets, allowing researchers to…

Provides full support for international character sets, allowing researchers to use papers in their own language. DistillerSR is a systematic review software. It was designed from the ground up to…

Covidence
Desktop

Covidence

Works seamlessly with reference managers like EndNote, Zotero, Refworks,…

Works seamlessly with reference managers like EndNote, Zotero, Refworks, Mendeley or any tool that support RIS, CSV or PubMedXML formats. Covidence is a service working in partnership with Cochrane…

colwiz
Web
Mobile
Desktop

colwiz

Supports academic, industrial and governmental research by providing a…

Supports academic, industrial and governmental research by providing a multi-purpose research platform. Colwiz is a software start-up that has grown out of the University of Oxford. The goal of this…

CiteULike
Web

CiteULike

Helps to store, organize and share the scholarly papers reading by users.…

Helps to store, organize and share the scholarly papers reading by users. CiteULike automatically extracts the citation details. It all works from within web browser. Users can share library with…

Citavi
Desktop

Citavi

Supports every step of the academic research process. Citavi provides access to…

Supports every step of the academic research process. Citavi provides access to world-class databases and library catalogs. User can even use each online resource‘s specific search options. Citavi…

CADIMA
Web

CADIMA

Offers practical guidance for potential review authors especially in the fields…

Offers practical guidance for potential review authors especially in the fields of environment, agriculture and impact assessment. CADIMA supports the conduct of systematic reviews and…

Bibus
Desktop

Bibus

Allows users to search, edit, and sort bibliographic records. Bibus is a…

Allows users to search, edit, and sort bibliographic records. Bibus is a bibliographic and reference management software. It contains features that makes it unique among open source and even…

BibDesk
Desktop

BibDesk

Permits to keep track of both the bibliographic information and the associated…

Permits to keep track of both the bibliographic information and the associated files or web links. BibDesk is a graphical bibliography manager for OS X, providing powerful BibTeX file management for…

Bebop
Desktop

Bebop

Provides a web interface to a list of publications stored in a BibTeX file.…

Provides a web interface to a list of publications stored in a BibTeX file. Bebop allows browsing by author, year, document type, topic and keywords using PHP, Javascript and XML technologies. It can…

Zotero
Desktop

Zotero

A powerful free personal bibliographic manager (PBM) for writers. Use of a PBM…

A powerful free personal bibliographic manager (PBM) for writers. Use of a PBM allows the writer to focus on content, rather than the tedious details of formatting citations and references. Zotero…

Information

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.