ReformAlign specifications


Unique identifier OMICS_33324
Name ReformAlign
Alternative name Reformed Alignments
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Windows
Programming languages C++
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes




No version available


  • person_outline Dimitrios Lyras

Publication for Reformed Alignments

ReformAlign citation


ReformAlign: improved multiple sequence alignments using a profile based meta alignment approach

BMC Bioinformatics
PMCID: 4133627
PMID: 25099134
DOI: 10.1186/1471-2105-15-265

[…] We assessed the effect ReformAlign on the deriving alignments of ten leading methods: ClustalW [], ClustalO [], MUSCLE [, ], MAFFT [], Kalign [], GramAlign [], ProbConsRNA [], R-Coffee [, ], PicXAA [] and Dialign-TX []. The […]

ReformAlign institution(s)
Faculty of Biology, Department II, Ludwig-Maximilians Universit√§t M√ľnchen, Planegg-Martinsried, Germany
ReformAlign funding source(s)
Supported by the German Science Foundation DFG through grant number ME 3134/4-1.

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