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regNet specifications

Information


Unique identifier OMICS_20793
Name regNet
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Requirements
devtools, glmnet, Matrix, lars, covTest
Maintained Yes

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  • person_outline Michael Seifert <>

Publication for regNet

regNet in publications

 (6)
PMCID: 5819370
PMID: 29524934
DOI: 10.15171/ijhpm.2017.130

[…] final version. , 1institute for physical activity and nutrition, school of exercise and nutrition sciences, deakin university, geelong, vic, australia. 2school of regulation and global governance (regnet), college of asia and the pacific, australian national university, canberra, australia. 3institute of policy studies, university brunei darussalam, gadong, brunei darussalam. 4southgate […]

PMCID: 5135831
PMID: 27912772
DOI: 10.1186/s12992-016-0223-3

[…] contributions to ongoing iterations and final conclusions. both authors read and approved the final manuscript., phillip baker is a research fellow at the school of regulation and global governance (regnet), college of asia and the pacific, at the australian national university., sharon friel is a professor of health equity and director of the school of regulation and global governance (regnet), […]

PMCID: 5135808
PMID: 27912731
DOI: 10.1186/s12859-016-1385-y

[…] and interactnet.cgs_l2), the sum of the differentially gene expression scores between cancer and normal for the downstream genes of the mutation target genes in the regulatory network (regnet.deg_score), the distance between the mutation site and its nearest cancer risk locus (distance.to.gwas), the h3k27me3 signals in the cancer cells, and the h3k4me1 signals […]

PMCID: 4894925
PMID: 27335769
DOI: 10.1186/s13612-016-0040-8

[…] (anderson ). also approaches to self-improvement and development opportunities in other areas, apart from therapy, e.g., leadership, cannot be imagined without a good and functioning dialog (regnet ). all in all, not only content but also the style of communication is crucial for the resulting perceptions and actions of the communication partners., in communication psychology, different […]

PMCID: 2978221
PMID: 20950452
DOI: 10.1186/1471-2105-11-517

[…] into account whether the pair of genes is statistically significant. for this reason we apply a statistical procedure to control the false discovery rate. the performance of our approach, named regnet, is experimentally tested on two well-known data sets: saccharomyces cerevisiae and e.coli data set. first, the biological coherence of the results are tested. second the e.coli […]


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regNet institution(s)
Carl Gustav Carus Faculty of Medicine, Technische Universit├Ąt Dresden, Institute for Medical Informatics and Biometry, Dresden, Germany; National Center for Tumor Diseases (NCT), Dresden, Germany; Institute of Molecular Systems Biology, Zurich, Switzerland; Cellular Networks and Systems Biology, CECAD, University of Cologne, Cologne, Germany

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