RegulonDB

• Julio Collado-Vides <collado at ccg.unam.mx>

Programa de Genómica Computacional, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Morelos, Mexico ; UMR_S 1090 TAGC, INSERM, Marseille, France; Laboratorio Internacional de Investigación sobre el Genoma Humano, Universidad Nacional Autónoma de México, Santiago de Querétaro, QRO, Mexico; Departamento de Microbiologia Molecular, IBT, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, Mexico; Institute of Computational Linguistics, University of Zurich, Zurich, Switzerland

Universidad Nacional Autónoma de México; National Institute of General Medical Sciences of the National Institutes of Health [R01GM110597]; Department of Health and Human Services; National Institutes of Health; National Institute of General Medical Sciences, under Cooperative Agreement [2U24GM077678-24A1]

• (Gama-Castro et al., 2016) RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond. Nucleic acids research.
  PMID: 26527724
• (Weiss et al., 2013) Evidence classification of high-throughput protocols and confidence integration in RegulonDB. Database.
  PMID: 23327937
• (Salgado et al., 2013) RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic acids research.
  PMID: 23203884
• (Salgado et al., 2012) Extracting regulatory networks of Escherichia coli from RegulonDB. Methods in molecular biology.
  PMID: 22144154
• (Gama-Castro et al., 2011) RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units). Nucleic acids research.
  PMID: 21051347
• (Gama-Castro et al., 2008) RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation. Nucleic acids research.
  PMID: 18158297
• (Salgado et al., 2006) RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions. Nucleic acids research.
  PMID: 16381895
• (Salgado et al., 2004) RegulonDB (version 4.0): transcriptional regulation, operon organization and growth conditions in Escherichia coli K-12. Nucleic acids research.
  PMID: 14681419
• (Salgado et al., 2001) RegulonDB (version 3.2): transcriptional regulation and operon organization in Escherichia coli K-12. Nucleic acids research.
  PMID: 11125053
• (Salgado et al., 2000) RegulonDB (version 3.0): transcriptional regulation and operon organization in Escherichia coli K-12. Nucleic acids research.
  PMID: 10592182
• (Salgado et al., 1999) RegulonDB (version 2.0): a database on transcriptional regulation in Escherichia coli. Nucleic acids research.
  PMID: 9847141
• (Huerta et al., 1998) RegulonDB: a database on transcriptional regulation in Escherichia coli. Nucleic acids research.
  PMID: 9399800

• Eubacteria
  • Escherichia coli