RATs specifications

Unique identifier:
OMICS_18188
Software type:
Package/Module
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS, Windows
License:
MIT License
Version:
0.4.4
Requirements:
Data.table, MatrixStats, ggplot2, Shiny
Name:
Relative Abundance of Transcripts
Interface:
Command line interface
Input data:
Transcript abundance estimates with or without bootstrapping.
Programming languages:
R
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes

versioning

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No versioning.

RATs distribution

download

RATs support

Documentation

Maintainer

  • Gordon Simpson <>

forum

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Credits

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Publications

Institution(s)

Division of Computational Biology, School of Life Sciences, University of Dundee, Dundee, UK; Centre for Gene Regulation & Expression, School of Life Sciences, University of Dundee, Dundee, UK; Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee, UK; Cell and Molecular Sciences, James Hutton Institute, Invergowrie, Dundee, UK

Funding source(s)

Supported by Wellcome Trust Strategic Awards [098439/Z/12/Z and WT097945], and Biotechnology and Biological Sciences Research Council Grants [BB/H002286/1; BB/J00247X/1; BB/M010066/1; BB/M004155/1].

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