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REMAP specifications

Information


Unique identifier OMICS_13135
Name REMAP
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Chemical-chemical similarity scores, Protein-protein similarity scores
Operating system Unix/Linux
Programming languages MATLAB
License MIT License
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Documentation


Maintainer


  • person_outline Lei Xie

Publication for REMAP

REMAP citation

library_books

Improved genome scale multi target virtual screening via a novel collaborative filtering approach to cold start problem

2016
Sci Rep
PMCID: 5153628
PMID: 27958331
DOI: 10.1038/srep38860

[…] account of in the second step., to validate the algorithm, we compared it to a number of different methods for the same problem, namely kbmf2k, wnn, wnn-gip, netlaprls, blm-nii, cmf, nrlmf, prw, remap, chem08, pharm10, daspfind, nrwrh and hgbi in several different benchmarks, namely yam, yam, and zinc., we first tested the accuracy of our algorithm in the classic yam08 benchmark designed […]


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REMAP institution(s)
The Graduate Center, The City University of New York, NY, USA; Department of Computer Science, University of Northern Iowa, Cedar Falls, IA, USA; Department of Computer Science and Technology, Nanjing University, Nanjing, Jiangsu, China; School of Computing, Informatics and Decision Systems Engineering, Arizona State University, Tempe, AZ, USA; Academy for Information Technology, Union County Vocational-Technical Schools, Scotch Plains, NJ, USA; High Technology High School, Lincroft, NJ, USA; Department of Computer Science, Hunter College, The City University of New York, NY, USA
REMAP funding source(s)
This research was supported by the National Library of Medicine of the National Institute of Health under the award number R01LM011986, National Science Foundation under the award number CNS-0958379, CNS-0855217, ACI-1126113, and the City University of New York High Performance Computing Center at the College of Staten Island and, in part, by the 2016 UNI’s Summer Fellowship.

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