RENT+ specifications

Unique identifier:
OMICS_14783
Interface:
Command line interface
Input data:
Rent+ takes a matrix of binary haplotypes
Output format:
NEWICK
Programming languages:
Java
Version:
0.5
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Output data:
A list of tree topologies, and TMRCAs for each SNP site.
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Stability:
Stable

versioning

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RENT+ distribution

download

RENT+ support

Documentation

Maintainer

  • Ling-Yun Wu <>

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Publications

Institution(s)

Department of Computer Science and Engineering, University of Connecticut, Storrs, CT, USA

Funding source(s)

This work is partly supported by U.S. National Science Foundation grants IIS-0953563 and IIS-1447711. Parts of simulations are performed on a computer cluster that is supported under a grant S10-RR027140 from National Institutes of Health.

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