Immune repertoire sequencing data analysis software tools

The immunological repertoire is the collection of trans-membrane antigen-receptor proteins located on the surface of T and B cells. Repertoire sequencing (Rep-seq) has transformed the field of antigen receptor diversity studies, enabling deep and quantitative analysis for deciphering adaptive immunity function in health and disease

Source text:
(Benichou et al., 2012) Rep-Seq: uncovering the immunological repertoire through next-generation sequencing. Immunology.

Data preprocessing

Data processing

Data visualization

Workflows

Unclassified tools