RepEx statistics

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Citations per year

Number of citations per year for the bioinformatics software tool RepEx
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Tool usage distribution map

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RepEx specifications

Information


Unique identifier OMICS_25892
Name RepEx
Alternative name Repeat Extractor
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Stability Stable
Maintained Yes

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Versioning


No version available

Maintainers


  • person_outline K. Sekar
  • person_outline K. Sekar

Publication for Repeat Extractor

RepEx citation

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Repetitive Sequences in Plant Nuclear DNA: Types, Distribution, Evolution and Function

2014
PMCID: 4411372
PMID: 25132181
DOI: 10.1016/j.gpb.2014.07.003

[…] s web tools have been recently introduced for the analysis of repetitive sequences. A tool called “REViewer” was developed for visualizing and analyzing repetitive elements . A comprehensive toolkit “RepEx” was developed by Gurusaran et al. for extracting various repeats (inverted, everted and mirror) from genomic sequences. Recently, Novák et al. introduced a collection of software tools called […]


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RepEx institution(s)
Supercomputer Education and Research Centre, Indian Institute of Science, Bangalore, India
RepEx funding source(s)
Supported by the Department of Information Technology (DIT), Government of India.

RepEx review

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tokeemd tareq

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Desktop
It works, but that's it. Too slow for any actual analysis. I uploaded a phage genome (