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Repitools

A software package for the analysis of enrichment-based epigenomic data. Features include summarization and visualization of epigenomic data across promoters according to gene expression context, finding regions of differential methylation/binding, etc.

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Repitools forum

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Repitools classification

Repitools specifications

Software type:
Package/Module
Restrictions to use:
None
Programming languages:
R
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU Lesser General Public License version 3.0
Version:
1.0.11
Requirements:
methods

Subtools

  • BayMeth

Repitools distribution

versioning

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No versioning.

Repitools support

Documentation

Maintainer

  • Mark Robinson <>

Credits

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Publications

Institution(s)

Epigenetics Laboratory, Cancer Program, Garvan Institute of Medical Research, Darlinghurst, Australia

Funding source(s)

National Health and Medical Research Council (NH&MRC) project (427614, 481347) and Fellowship; Cancer Institute NSW grants (CINSW); NBCF Program Grant

Link to literature

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.