Protocols

ReprOlive specifications

Information


Unique identifier OMICS_26429
Name ReprOlive
Alternative name olivoDB
Restrictions to use None
Database management system MySQL
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes

Maintainer


  • person_outline Gonzalo Claros

Publication for ReprOlive

ReprOlive citation

call_split

S nitroso and nitro proteomes in the olive (Olea europaea L.) pollen. Predictive versus experimental data by nano LC MS

2017
PMCID: 5647517
PMID: 29062872
DOI: 10.1016/j.dib.2017.09.058
call_split See protocol

[…] org/iSNO-AAPair) , GPS-SNO (http://sno.biocuckoo.org) and SNOSite (http://csb.cse.yzu.edu.tw/SNOSite/) were challenged with an olive pollen transcriptome described in the ReprOlive database (http://reprolive.eez.csic.es) using different thresholds, when available. For Tyr-nitration prediction, the GPS-YNO2 (http://yno2.biocuckoo.org) tool was used instead, also using two different thresholds. […]

ReprOlive institution(s)
Department of Biochemistry, Cell and Molecular Biology of Plants, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Granada, Spain; Plataforma Andaluza de Bioinformática, Edificio de Bioinnovación, Universidad de Málaga, Málaga, Spain; Departamento de Biología Molecular y Bioquímica, Facultad de Ciencias, Universidad de Málaga, Málaga, Spain; Departamento de Lenguajes y Ciencias de la Computación, Universidad de Málaga, Málaga, Spain
ReprOlive funding source(s)
Supported by the ERDF (European Regional Development Fund) and (i) Ministerio de Ciencia e Innovación [grant numbers BFU2011-22779, TIN2011-25840 and TIN2014- 58304-R], and (ii) Plan Andaluz de Investigación, Desarrollo e Innovación [grant numbers P10-CVI-6075, P10-AGR-6274, P11-CVI-7487, P11- TIC-7529 and P12-TIC-1519].

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