RetroPath specifications

Unique identifier:
OMICS_20278
Software type:
Pipeline/Workflow
Restrictions to use:
None
Version:
2.0
Maintained:
Yes
Alternative name:
RetroPath2.0
Interface:
Web user interface
Computer skills:
Basic
Stability:
Stable

RetroPath specifications

Unique identifier:
OMICS_20278
Software type:
Pipeline/Workflow
Restrictions to use:
None
Operating system:
Unix/Linux
Version:
2.0
Requirements:
Knime Analytics Platform
Alternative name:
RetroPath2.0
Interface:
Command line interface
Input data:
A first set of compounds (the source), a second set of compounds (the sink) and a set of reaction rules.
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes

versioning

tutorial arrow
×
Upload and version your source code
Get a DOI for each update to improve tool traceability. Archive your releases so the community can easily visualize progress on your work.
Facilitate your tool traceability
Sign up for free to upload your code and get a DOI

No versioning.

RetroPath distribution

download

RetroPath support

Maintainers

  • Thomas Duigou <>
  • Jean-Loup Faulon <>
  • Thomas Duigou <>
  • Jean-Loup Faulon <>

Additional information

https://www.myexperiment.org/workflows/4987.html

forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.
Promote your work
Sign up for free to badge your contributorship

Publications

Institution(s)

CNRS-UMR8030 / Laboratoire iSSB, Université Paris-Saclay, Evry, France; CEA, DRF, IG, Genoscope, Evry, France; Micalis Institute, INRA, AgroParisTech, Universite Paris-Saclay, Jouy-en-Josas, France; SYNBIOCHEM Centre, Manchester Institute of Biotechnology, University of Manchester, Manchester, UK

Funding source(s)

Supported by the French National Research Agency [ANR-15-CE1-0008], the Biotechnology and Biological Sciences Research Council, Centre for synthetic biology of fine and speciality chemicals [BB/M017702/1], Synthetic Biology Applications for Protective Materials [EP/N025504/1], and GIP Genopole.

User review

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

No review has been posted.

User review

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

No review has been posted.

Related Tools