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RFCoil specifications

Information


Unique identifier OMICS_09326
Name RFCoil
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Input data Protein sequence (RAW format) and sequence of coiled coil register (a sequence of "a", "b", "c", "d", "e", "f" and "g")
Output data Predicted probability to be parallel dimeric and trimeric coiled-coil
Operating system Unix/Linux
Computer skills Advanced
Stability No
Maintained No

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Information


Unique identifier OMICS_09326
Name RFCoil
Interface Web user interface
Restrictions to use Academic or non-commercial use
Input data Protein sequence (RAW format) and sequence of coiled coil register (a sequence of "a", "b", "c", "d", "e", "f" and "g")
Output data Predicted probability to be parallel dimeric and trimeric coiled-coil
Computer skills Basic
Stability No
Maintained No

Maintainer


This tool is not available anymore.

Publication for RFCoil

RFCoil in publication

PMCID: 4570195
PMID: 26370878
DOI: 10.1038/srep14063

[…] all ratios (). this confirmed that all four peptide combinations primarily associate in a 1:1 ratio. formation of dimers was verified using several predictive analysing tools, including logicoil, rfcoil, and procoil., formation of transient or less stable oligomers can however not be fully excluded but md simulations further supported formation of stable parallel heterodimers for all peptides […]


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RFCoil institution(s)
Department of Biochemistry and Molecular Biology, Faculty of Medicine, Monash University, Melbourne, Australia; State Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, Beijing, China; School of Mathematics and Computer Science, Shanxi Normal University, Linfen, China; National Engineering Laboratory for Industrial Enzymes and Key Laboratory of Systems Microbial Biotechnology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China

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