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Rhodobase specifications


Unique identifier OMICS_22248
Name Rhodobase
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability No
Maintained No


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Publication for Rhodobase

Rhodobase citations


gViz, a novel tool for the visualization of co expression networks

BMC Res Notes
PMCID: 3214194
PMID: 22032859
DOI: 10.1186/1756-0500-4-452

[…] analysis., here is a summary of gviz main advantages: an important feature of gviz is the ability to render dynamic networks. this feature does not appear in most network visualization software (rhodobase, starnet, ... [,]), although it does in cytoscape. gviz has also a unique additional feature of reading and displaying graphml-based networks. another important feature of gviz […]


Synergistic use of plant prokaryote comparative genomics for functional annotations

BMC Genomics
PMCID: 3223725
PMID: 21810204
DOI: 10.1186/1471-2164-12-S1-S2

[…] (encyclopedia of e. coli genes and metabolism (http://biocyc.org/ecoli/) []; cyanobase (http://genome.kazusa.or.jp/cyanobase) []; pseudomonas genome database (http://www.pseudomonas.com/) []; and rhodobase (http://rhodobase.org/index.php). collections of arabidopsis global expression and proteomics data with on-line tools for visualization and analysis: atted […]

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Rhodobase institution(s)
Department of Molecular Biology, University of Wyoming, Laramie, WY, USA; Department of Biophysics, Faculty of Physics, Moscow State University, Moscow, Russia
Rhodobase funding source(s)
Supported in part by the United States Department of Agriculture Cooperative State Research, Education, Extension and Service grant, Global Perspectives travel grants from University of Wyoming College of Agriculture and Natural Resources, and Summer Bioinformatics Scholarship from Wyoming INBRE.

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