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Rice PIPELINE specifications


Unique identifier OMICS_24004
Interface Web user interface
Restrictions to use None
Computer skills Basic
Maintained No


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Publication for Rice PIPELINE

Rice PIPELINE citations


Increase in Cellulose Accumulation and Improvement of Saccharification by Overexpression of Arabinofuranosidase in Rice

PLoS One
PMCID: 3817243
PMID: 24223786
DOI: 10.1371/journal.pone.0078269

[…] by the phenol sulfuric acid method. the saccharification efficiency was calculated as sugar liberation (%)  =  µg/mg dry weight of leaves., to select the araf genes of rice, we searched the rice pipeline database (http://cdna01.dna.affrc.go.jp/pipe/; ) and identified 16 putative araf genes with reference to the carbohydrate-active enzyme [cazy] database (http://www.cazy.org; ), showing […]


Plasmodesmal receptor like kinases identified through analysis of rice cell wall extracted proteins

PMCID: 3111878
PMID: 21161304
DOI: 10.1007/s00709-010-0251-4

[…] cloning. on this basis, 15 rlks were studied for targeting as fluorescent protein fusions with gfp using an agrobacterium-based transient expression system. 15 rlk cdnas were obtained from the rice pipeline database (http://cdna01.dna.affrc.go.jp/pipe/; yazaki et al. ). table  presents the genomic information for these 15 rlk genes. table 1sp signal peptides, tmd trans-membrane domains, pm […]

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Rice PIPELINE institution(s)
Department of Molecular Biology, National Institute of Agrobiological Sciences, Kannon-dai, Tsukuba, Japan; Hitachi Software Engineering Co., Ltd, Higashishinagawa, Tokyo, Japan
Rice PIPELINE funding source(s)
Supported by a grant from the Ministry of Agriculture, Forestry, and Fisheries of Japan (Rice Genome Project SY-1112).

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