A catalog of known and/or predicted biochemical pathways from rice (Oryza sativa). Pathways and genes presented in this catalog are primarily based on the annotations carried out by Gramene database project on the release 5 of the TIGR-assembly of Oryza sativa japonica cv. Nipponbare genome sequenced by IRGSP. RiceCyc undergoes regular rounds of curation in order to integrate exciting new discoveries on biochemical pathways in rice. The computationally generated pathways are subjected to manual curation based on published literature.
Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA; Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, USA; EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK; Informatics and Bio-computing Program, Ontario Institute of Cancer Research, Toronto, Canada; Department of Biochemistry and Molecular Pharmacology, NYU School of Medicine, New York, NY, USA; NAA Plant, Soil & Nutrition Laboratory Research Unit, USDA-ARS, Ithaca, NY, USA