RILogo specifications

Information


Unique identifier OMICS_09353
Name RILogo
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Sequence
Input format Stockholm, CLUSTAL, FASTA
Output data RILogo produces an SVG image with two sequence logos, one for each interaction partner. Intra- and intermolecular base pairs are shown by arcs or straight lines between both logos.
Operating system Unix/Linux
Programming languages C++
License GNU Lesser General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


Add your version

Maintainer


  • person_outline Peter Menzel <>

Information


Unique identifier OMICS_09353
Name RILogo
Interface Web user interface
Restrictions to use None
Input data Sequence
Input format Stockholm, CLUSTAL, FASTA
Output data RILogo produces an SVG image with two sequence logos, one for each interaction partner. Intra- and intermolecular base pairs are shown by arcs or straight lines between both logos.
Programming languages C++
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Peter Menzel <>

Publication for RILogo

RILogo institution(s)
The Bioinformatics Centre, Department of Biology, University of Copenhagen, Ole Maal√łes Vej, Copenhagen, Denmark; Center for non-coding RNA in Technology and Health; IKVH, University of Copenhagen, Frederiksberg, Denmark

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