RILogo specifications

Unique identifier:
OMICS_09353
Interface:
Command line interface
Input data:
Sequence
Output data:
RILogo produces an SVG image with two sequence logos, one for each interaction partner. Intra- and intermolecular base pairs are shown by arcs or straight lines between both logos.
Programming languages:
C++
Computer skills:
Advanced
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Input format:
Stockholm, CLUSTAL, FASTA
Operating system:
Unix/Linux
License:
GNU Lesser General Public License version 3.0
Stability:
Stable

versioning

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RILogo specifications

Unique identifier:
OMICS_09353
Restrictions to use:
None
Input format:
Stockholm, CLUSTAL, FASTA
Programming languages:
C++
Stability:
Stable
Interface:
Web user interface
Input data:
Sequence
Output data:
RILogo produces an SVG image with two sequence logos, one for each interaction partner. Intra- and intermolecular base pairs are shown by arcs or straight lines between both logos.
Computer skills:
Basic
Maintained:
Yes

RILogo support

Maintainer

  • Peter Menzel <>
  • Peter Menzel <>

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Publications

Institution(s)

The Bioinformatics Centre, Department of Biology, University of Copenhagen, Ole Maal√łes Vej, Copenhagen, Denmark; Center for non-coding RNA in Technology and Health; IKVH, University of Copenhagen, Frederiksberg, Denmark

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