RIO specifications


Unique identifier OMICS_15759
Name RIO
Alternative name Resampled Inference of Orthologs
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Input data A query protein sequence Q with unknown function.
Output data A list of proteins orthologous to Q, sorted according to a bootstrap confidence value.
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Version 4.0
Stability Beta
Maintained Yes



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  • person_outline Sean Eddy <>

Publication for Resampled Inference of Orthologs

RIO institution(s)
Howard Hughes Medical Institute and Department of Genetics, Washington University School of Medicine, St. Louis, MO, USA
RIO funding source(s)
This work was supported primarily by a grant from Monsanto Company, and also by the Howard Hughes Medical Institute and grant HG01363 from the NIH National Human Genome Research Institute.

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