RIPSeeker specifications

Information


Unique identifier OMICS_00569
Name RIPSeeker
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input format SAM, BAM, BED
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 1.12.0
Stability Stable
Requirements methods, S4Vectors, IRanges, GenomicRanges, SummarizedExperiment, Rsamtools, GenomicAlignments, rtracklayer
Maintained Yes

Subtool


  • ripSeek

Versioning


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Documentation


Publication for RIPSeeker

RIPSeeker institution(s)
Department of Computer Science, University of Toronto, Toronto, ON, Canada; The Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, ON, Canada; Department of Molecular Genetics, University of Toronto, Toronto, ON, Canada; Banting and Best Department of Medical Research, University of Toronto, Toronto, ON, Canada
RIPSeeker funding source(s)
Ontario Research Fund - Global Leader (Round 2); Natural Sciences and Engineering Research Council (NSERC) [327612]; NSERC Canada Graduate Scholarship and Ontario Graduate Scholarship

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