RISP specifications


Unique identifier OMICS_08405
Alternative name RNA-interaction site prediction
Interface Web user interface
Restrictions to use None
Input data Protein sequence
Computer skills Basic
Stability No
Maintained No


This tool is not available anymore.

Publication for RNA-interaction site prediction

RISP citation


Predicting RNA binding residues from evolutionary information and sequence conservation

BMC Genomics
PMCID: 3005934
PMID: 21143803
DOI: 10.1186/1471-2164-11-S4-S2

[…] idation, window-based cross-validation can yield overly optimistic estimates of the performance of classifier relative to the estimates obtained using sequence-based cross-validation. RNAProB, BindN, RISP, PRINTR and PiRaNhA are predictors that report performance window-based k-fold cross-validation while Pprint and RNABindR report performance with sequence-based k-fold cross-validation. The predi […]

RISP institution(s)
Department of Biological Science and Medical Engineering, Southeast University, Nanjing, China

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