rmeta protocols

rmeta specifications

Information


Unique identifier OMICS_00245
Name rmeta
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 2.16
Stability Stable
Requirements grid
Maintained Yes

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Documentation


Maintainer


  • person_outline Thomas Lumley <>

rmeta IN pipelines

 (3)
2015
PMCID: 4608673
PMID: 26474488
DOI: 10.1371/journal.pone.0140758

[…] pairs in the training set. to compare their relative contributions, the effect betas from the training set of each predictive model were plotted using the “forestplot” function from the r package “rmeta” (version 2.16), which provides tools for visualizing meta-analysis results. corresponding receiver operating characteristic (roc) curves for the predictive models were generated using […]

2014
PMCID: 4175587
PMID: 25226531
DOI: 10.1038/ncomms5831

[…] (supplementary data 1). for the selected snps, estimates from the discovery (genomic-control corrected) and follow-up cohort(s) were combined using fixed-effects inverse-variance meta-analysis (r ‘rmeta’ package), while testing for overall heterogeneity using cochran’s q-test. signals below a genome-wide significance threshold of p<2.5 × 10−8 (accounting for two gwas analyses) […]

2012
PMCID: 3446466
PMID: 22541845
DOI: 10.1186/ar3816

[…] were not matched for sex, association analysis also included sex as a possible confounder. analysis of association of haplotypes was also performed using plink. meta-analysis was carried out using rmeta software (within stata 8.0, stata, college station, tx, usa) to calculate the combined mantel-haenszel or using a fixed-effects model and the breslow-day test for heterogeneity., the māori […]

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