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RNA CoMPASS | A dual approach for pathogen and host transcriptome analysis of RNA-seq datasets

A web-based GUI distributed computational pipeline, provides all-in-one functionality including human transcriptome quantification and the typical endogenous RNA-Sequencing analysis along with the investigation of exogenous sequences.

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RNA CoMPASS forum

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RNA CoMPASS classification

RNA CoMPASS specifications

Unique identifier:
OMICS_01410
Interface:
Command line interface
Operating system:
Unix/Linux
Stability:
Stable
Software type:
Pipeline/Workflow
Restrictions to use:
None
Computer skills:
Advanced
Maintained:
Yes

RNA CoMPASS distribution

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Credits

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Publications

Institution(s)

Department of Computer Science, University of New Orleans Lakefront, New Orleans, LA, USA; Department of Pathology, Tulane University, New Orleans, LA, USA; Department of Mathematics, Tulane University, New Orleans, LA, USA; Department of Mathematics, Tulane University, New Orleans, LA, USA; Department of Pathology, Tulane University, New Orleans, LA, USA; Department of Microbiology, Immunology and Parasitology, Louisiana State University Health Sciences Center, New Orleans, LA, USA; Research Institute for Children, Children's Hospital of New Orleans, New Orleans, LA, USA

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