Provides a resource for the automatic search of user tailored, three dimensional fragments within a set of RNA structures. RNA FRABASE is a web-accessible database with an engine for automatic search of the 3D fragments. It includes a large collection of structural data about RNA molecules, in both their isolated and complexed form, all of which is derived from their PDB deposited atom coordinates.
Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland; Institute of Computing Science, Poznan University of Technology, Poznan, Poland; Poznan Supercomputing and Networking Centre, Poznan, Poland; Automated Scheduling, Optimisation and Planning Group, School of Computer Science, University of Nottingham, Nottingham, UK
RNA FRABASE funding source(s)
Supported by Polish Ministry of Science and Higher Education [PBZ-MniSW-07/1/ 2007/01, NN 519314635], and the Erasmus fellowships to at the University of Nottingham.