RNA interference analysis software tools and databases

Functional genomic studies by RNA interference (RNAi) are now widely used to determine gene functions in a variety of cell-based and in vivo model systems (Boutros and Ahringer, 2008). RNAi is triggered by exogenous double-stranded (ds) RNAs causing the degradation of endogenous…

RNA interference steps

Bioinformatics tools

Databases

RNA interference analysis software tools and databases

Most Recent Tools

A A A
Achilles
Dataset

Achilles

Identifies and catalogues genetic vulnerabilities across hundreds of…

Identifies and catalogues genetic vulnerabilities across hundreds of genomically characterized cancer cell lines. Achilles is a project to facilitates the discovery of context-specific dependencies,…

G T A T C G C T A
RNA workbench
Server

RNA workbench

Establishes a central, redistributable workbench for scientists and programmers…

Establishes a central, redistributable workbench for scientists and programmers working with RNA-related data. The RNA workbench builds a sustainable community around it. This platform is unique in…

A A A
mTD
Dataset

mTD MicroRNAs affecting Therapeutic effects of Drugs

Provides comprehensive information about miRNAs affecting drug therapies. mTD…

Provides comprehensive information about miRNAs affecting drug therapies. mTD is a database that provides the sentences describing the drug-miRNA interactions with links to corresponding publications…

G T A T C G C T A
MirSTP
Desktop

MirSTP MIRna transcription Start sites Tracking Program

Identifies active microRNA transcription start sites (miRNA TSSs) from nascent…

Identifies active microRNA transcription start sites (miRNA TSSs) from nascent transcriptomes. MirSTP provides accurate TSS prediction for human intergenic miRNAs at a high resolution by using…

Most Popular Tools

A A A
MiRdup
Desktop

MiRdup

A computational predictor for the identification of the most likely miRNA…

A computational predictor for the identification of the most likely miRNA location within a given pre-miRNA or the validation of a candidate miRNA. MiRdup is based on a random forest classifier…

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.