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RNA methylation databases | RNA modification data analysis

Methyltranscriptome is an exciting new area that studies the mechanisms and functions of methylation in transcripts.

Source text:
(Liu et al., 2015) MeT-DB: a database of transcriptome methylation in mammalian cells. Nucleic Acids Res.

MODOMICS
Dataset

MODOMICS

Provides comprehensive information of RNA modifications concerning the chemical…

Provides comprehensive information of RNA modifications concerning the chemical structures of modified ribonucleosides, their biosynthetic pathways, RNA-modifying enzymes and location of modified…

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RMBase
Dataset

RMBase RNA Modification Base

A resource to decode the genome-wide landscape of RNA modifications identified…

A resource to decode the genome-wide landscape of RNA modifications identified from high-throughput modification data generated by 18 independent studies. RMBase is designed for decoding the…

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MeT-DB
Dataset

MeT-DB

A comprehensive resource for N6-methyladenosine (m6A) in mammalian…

A comprehensive resource for N6-methyladenosine (m6A) in mammalian transcriptome. MeT-DB includes a database that records publicaly available data sets from methylated RNA immunoprecipitation…

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RNAMDB
Dataset

RNAMDB RNA Modification Database

Provides a comprehensive listing of post-transcriptionally modified nucleosides…

Provides a comprehensive listing of post-transcriptionally modified nucleosides from RNA. RNAMDB employs an easy-to-use, searchable interface for obtaining detailed data on the 109 currently known…

CirGRDB
Dataset

CirGRDB

Searches, visualizes and interprets circadian genes and multiple…

Searches, visualizes and interprets circadian genes and multiple transcriptional and post-transcriptional regulatory. CirGRDB offers a user-friendly web interface that provides bench researchers…

PD_NGSAtlas
Dataset

PD_NGSAtlas

Aims at providing a reference resource combining both next-generation…

Aims at providing a reference resource combining both next-generation sequencing epigenomic and transcriptomic data and quantitative analysis of epigenetic and transcriptional alternations involved…

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M6Avar
Dataset

M6Avar

Collects functional variants and aimed at providing potential help for…

Collects functional variants and aimed at providing potential help for revealing the functional roles of m6A variants. m6Avar permits users to search or browse (i) m6A-associated genetic mutations…

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