RNA-seq 2G specifications

Information


Unique identifier OMICS_17187
Name RNA-seq 2G
Interface Web user interface
Restrictions to use None
Input data A read count matrix derived from RNA-seq data.
Input format TXT, TSV, CSV, RDS, RDATA, RDA, XLSX, XLS, HTML
Output data A six-column matrix with the same number of rows/genes.
Output format TAB
Computer skills Basic
Stability No
Maintained No

Maintainer


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Publication for RNA-seq 2G

RNA-seq 2G in publication

PMCID: 5898276
PMID: 29681917
DOI: 10.3389/fpls.2018.00458

[…] (). the transcript abundance was quantified as tpm (transcripts per million) and 100 bootstrap samples were performed. differential expressed genes (degs) between groups were obtained using the rna-seq 2g portal. from the 25 methods available in this portal, five methods were selected, which do not use log-transformed data as input and has its own normalization procedure (zhang et al., […]


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RNA-seq 2G institution(s)
Department of Biomedical and Health Informatics, The Children’s Hospital of Philadelphia, Philadelphia, PA, USA

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