RNA-seq portal specifications

Unique identifier:
OMICS_12983
Interface:
Web user interface
Input data:
Genome data
Output data:
Genome, gene, and peptide sequences
Programming languages:
Perl
Stability:
Stable
Software type:
Pipeline/Workflow
Restrictions to use:
None
Input format:
FASTQ
Output format:
GTF, BAM
Computer skills:
Basic
Maintained:
Yes
  • Animals
    • Bos taurus
    • Caenorhabditis elegans
    • Gallus gallus
    • Homo sapiens
    • Mus musculus

RNA-seq portal support

Maintainer

  • Weizhong Li <>

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Publications

Institution(s)

The Institute for Genomic Research, La Jolla, CA, USA; USA Department of Agriculture, Agriculture Research Service (USDA-ARS), Animal Genomics and Improvement Laboratory, Beltsville, MD, USA

Funding source(s)

Supported by the U. S. Department of Agriculture (USDA) National Institute of Food and Agriculture under Award No. 2013-67015-22957.

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