RNA2DMap statistics

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Citations per year

Number of citations per year for the bioinformatics software tool RNA2DMap

Tool usage distribution map

This map represents all the scientific publications referring to RNA2DMap per scientific context
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Associated diseases


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RNA2DMap specifications


Unique identifier OMICS_18675
Name RNA2DMap
Software type Package/Module
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Adobe Flash Player
Maintained Yes


  • person_outline Robin Gutell
  • person_outline Weijia Xu
  • person_outline Ame Wongsa
  • person_outline Lei Shang
  • person_outline Jamie Cannone

Publication for RNA2DMap

RNA2DMap citations


Numerical integration methods and layout improvements in the context of dynamic RNA visualization

BMC Bioinformatics
PMCID: 5450055
PMID: 28558664
DOI: 10.1186/s12859-017-1682-0

[…] loped, and two excellent reviews of them can be found in [, ], with notable examples that are still available including VARNA [], jViz.RNA [–], Forna [], PseudoViewer [–], 4SALE [, ], Assemble2 [, ], RNA2DMap [], R2R [], and R-Chie []. All Visualization software developed for RNA have as their goal to display an informative structure of the RNA molecule, usually focusing on its secondary structure […]


Fragmentation of the large subunit ribosomal RNA gene in oyster mitochondrial genomes

BMC Genomics
PMCID: 2996981
PMID: 20813041
DOI: 10.1186/1471-2164-11-485

[…] ch exhibit an interactive flash secondary structure browser and tables that reveal all of the secondary and tertiary interactions in the rRNA crystal structures, http://www.rna.ccbb.utexas.edu/SAE/2A/RNA2DMap/index.php, and http://www.rna.ccbb.utexas.edu/SAE/2A/xtal_Info/). Lastly, the ribosomal proteins interact with the rRNA and with one another to stabilize the network of interactions that prov […]

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RNA2DMap institution(s)
Texas Advanced Computing Center The University of Texas at Austin Austin, TX, USA; School of Information The University of Texas at Austin Austin, TX, USA; Institute for Cellular and Molecular Biology The University of Texas at Austin Austin, TX, USA
RNA2DMap funding source(s)
Supported by NIH grants GM085337 and GM067317 and the Welch Foundation F-1427.

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