RNA2DNAlign specifications

Information


Unique identifier OMICS_12823
Name RNA2DNAlign
Software type Framework/Library
Interface Command line interface, Graphical user interface
Restrictions to use None
Input data RNA and DNA sequencing datasets
Input format VCF, BAM
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability Stable
Requirements CIRCOS, R-Studio, Integrative Genome Viewer
Maintained Yes

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Documentation


Maintainer


  • person_outline Anelia Horvath <>

Publication for RNA2DNAlign

RNA2DNAlign institution(s)
McCormick Genomics and Proteomics Center, Department of Biochemistry and Molecular Medicine, The George Washington University, Washington D.C., MD, USA; University of Massachusetts Medical School, Graduate School of Biomedical Sciences, Program in Bioinformatics and Integrative Biology, Worcester, MA, USA; Department of Biochemistry and Molecular & Cellular Biology, Georgetown University, Washington D.C., MD, USA; Department of Computer Science, School of Engineering and applied Science, The George Washington University, Washington D.C., MD, USA; Department of Pharmacology and Physiology, The George Washington University, Washington D.C., MD, USA; Department of Mathematics, College of Engineering, Mathematics and Physical Sciences & EPSRC Centre for Predictive Modelling in Healthcare, University of Exeter, Exeter, UK
RNA2DNAlign funding source(s)
McCormick Genomic and Proteomic Center (MGPC), GWU; NIH National Center for Advancing Translational Sciences [UL1TR000075]; Clinical and Translational Science Institute at Children's National Medical Center [CTSI-CN]; Katzen Innovative Cancer Research Pilot Grant Program [RG0982]

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