RNA2DNAlign specifications

Unique identifier:
OMICS_12823
Interface:
Command line interface, Graphical user interface
Input data:
RNA and DNA sequencing datasets
Operating system:
Unix/Linux
Computer skills:
Advanced
Requirements:
CIRCOS, R-Studio, Integrative Genome Viewer
Software type:
Framework/Library
Restrictions to use:
None
Input format:
VCF, BAM
Programming languages:
Python
Stability:
Stable
Maintained:
Yes

versioning

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RNA2DNAlign distribution

download

RNA2DNAlign support

Documentation

Maintainer

  • Anelia Horvath <>

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Credits

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Publications

Institution(s)

McCormick Genomics and Proteomics Center, Department of Biochemistry and Molecular Medicine, The George Washington University, Washington D.C., MD, USA; University of Massachusetts Medical School, Graduate School of Biomedical Sciences, Program in Bioinformatics and Integrative Biology, Worcester, MA, USA; Department of Biochemistry and Molecular & Cellular Biology, Georgetown University, Washington D.C., MD, USA; Department of Computer Science, School of Engineering and applied Science, The George Washington University, Washington D.C., MD, USA; Department of Pharmacology and Physiology, The George Washington University, Washington D.C., MD, USA; Department of Mathematics, College of Engineering, Mathematics and Physical Sciences & EPSRC Centre for Predictive Modelling in Healthcare, University of Exeter, Exeter, UK

Funding source(s)

McCormick Genomic and Proteomic Center (MGPC), GWU; NIH National Center for Advancing Translational Sciences [UL1TR000075]; Clinical and Translational Science Institute at Children's National Medical Center [CTSI-CN]; Katzen Innovative Cancer Research Pilot Grant Program [RG0982]

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