RNAfbinv specifications

Information


Unique identifier OMICS_04762
Name RNAfbinv
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Danny Barash

Publication for RNAfbinv

RNAfbinv citation

library_books

An Efficient Minimum Free Energy Structure Based Search Method for Riboswitch Identification Based on Inverse RNA Folding

2015
PLoS One
PMCID: 4521916
PMID: 26230932
DOI: 10.1371/journal.pone.0134262

[…] re calculated using a flexible inverse RNA folding program that may take seconds/minutes on a standard PC depending on the length of the input structure. An extended inverse RNA folding solver called RNAfbinv [] is used to perform this task with suitable constraints for the search problem. The method is validated on the purine riboswitch guanine-binding aptamer domain. It is able to detect known p […]

RNAfbinv institution(s)
Department of Computer Science, Ben Gurion University of the Negev, Beer Sheva, Israel
RNAfbinv funding source(s)
The Lynne and William Frankel Center for Computer Sciences, Ben-Gurion University

RNAfbinv reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review RNAfbinv