RNAither specifications

Information


Unique identifier OMICS_12186
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data RNAither provides a function to generate a suitable input text file for the pipeline from the experimental output data. It contains a header describing the experiment, and a table containing, for each well or spot, the spot number and type (e.g. control or empty), the siRNA and/or gene name, the signal intensities (default is two channels), the plate and experiment number and the position of the well on the plate, as well as, if available, SDs and/or background intensity of the signal values.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License Artistic License version 2.0
Computer skills Advanced
Version 2.20.0
Stability Stable
Requirements topGO, RankProd, prada
Maintained Yes

Versioning


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Documentation


Maintainer


  • person_outline Lars Kaderali <>

RNAither article

RNAither institution(s)
Viroquant Research Group Modeling, University of Heidelberg, Heidelberg, Germany; Theoretical Bioinformatics, German Cancer Research Center, Heidelberg, Germany
RNAither funding source(s)
German Federal Ministry of Education and Research, BMBF, grant number 01313923 (FORSYS/Viroquant)

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