RNAmapper specifications

Information


Unique identifier OMICS_07379
Name RNAmapper
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Information


Unique identifier OMICS_07379
Name RNAmapper
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Publication for RNAmapper

RNAmapper citations

 (2)
library_books

A genetic basis for molecular asymmetry at vertebrate electrical synapses

2017
eLife
PMCID: 5462537
PMID: 28530549
DOI: 10.7554/eLife.25364.025

[…] . Within the linked region candidate mutations causing nonsense or missense changes, or those affecting gene expression levels, were identified as previously described (). Details can be found at www.RNAmapper.org. […]

library_books

Regulation of mitochondria dynactin interaction and mitochondrial retrograde transport in axons

2017
eLife
PMCID: 5413347
PMID: 28414272
DOI: 10.7554/eLife.22234.021

[…] ase/DNase free water. Sequencing was performed by the OHSU Massively parallel sequencing core on an Illumina HiSeq2000, generating approximately 30 million reads per condition. From this RNAseq data, RNAmapper identified a single nucleotide change in the start codon of the actr10 gene in the actr10nl15 mutant pool. The mutation (validated by sequencing and restriction digest of individual samples) […]

RNAmapper institution(s)
Division of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA

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