RNApeakFold specifications

Information


Unique identifier OMICS_17762
Name RNApeakFold
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data File with a list of RNA sequences.
Input format fasta
Output format Postscript and fasta files.
Operating system Unix/Linux
Programming languages Python
License Apache License version 2.0
Computer skills Advanced
Stability Stable
Requirements RNAfold from the Vienna Package
Maintained Yes

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Documentation


RNApeakFold article

RNApeakFold institution(s)
The Jackson Laboratory for Genomic Medicine, Farmington, CT, USA; University of Connecticut Health Center, Farmington, CT, USA; Research Programme on Biomedical Informatics (GRIB), Hospital del Mar Medical Research Institute (IMIM) – Pompeu Fabra University (UPF), Barcelona, Spain; Catalan Institution for Research and Advanced Studies (ICREA), Barcelona, Spain
RNApeakFold funding source(s)
Supported by NIH grants R21 HG007554 and R01 NS094637, the MINECO and FEDER (BIO2014-52566-R), AGAUR (SGR2014-1121), and the Sandra Ibarra Foundation for Cancer (FSI2013).

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